HL_6ZTN_052

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGACAGCC

Length

9 nucleotides

Bulged bases

6ZTN|1|BA|G|329, 6ZTN|1|BA|A|330, 6ZTN|1|BA|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTN_052 not in the Motif Atlas

Homologous match to HL_5J7L_144

Geometric discrepancy: 0.1123

The information below is about HL_5J7L_144

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

6ZTN|1|BA|G|327
6ZTN|1|BA|U|328
6ZTN|1|BA|G|329
6ZTN|1|BA|A|330
6ZTN|1|BA|C|331
6ZTN|1|BA|A|332
6ZTN|1|BA|G|333
6ZTN|1|BA|C|334
6ZTN|1|BA|C|335

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BV

50S ribosomal protein L24