HL_6ZTN_095

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTN_095 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.1288

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6ZTN|1|BA|G|2303
6ZTN|1|BA|G|2304
6ZTN|1|BA|U|2305
6ZTN|1|BA|C|2306
6ZTN|1|BA|G|2307
6ZTN|1|BA|G|2308
6ZTN|1|BA|A|2309
6ZTN|1|BA|C|2310
6ZTN|1|BA|A|2311
6ZTN|1|BA|U|2312
6ZTN|1|BA|C|2313

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein L5