HL_6ZTN_102

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTN_102 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.132

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6ZTN|1|BA|C|2551
6ZTN|1|BA|OMU|2552
6ZTN|1|BA|G|2553
6ZTN|1|BA|U|2554
6ZTN|1|BA|U|2555
6ZTN|1|BA|C|2556
6ZTN|1|BA|G|2557

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA