HL_6ZTN_106

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

6ZTN|1|BA|G|2751, 6ZTN|1|BA|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTN_106 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0809

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

6ZTN|1|BA|C|2745
6ZTN|1|BA|U|2746
6ZTN|1|BA|G|2747
6ZTN|1|BA|A|2748
6ZTN|1|BA|A|2749
6ZTN|1|BA|A|2750
6ZTN|1|BA|G|2751
6ZTN|1|BA|C|2752
6ZTN|1|BA|A|2753
6ZTN|1|BA|U|2754
6ZTN|1|BA|C|2755
6ZTN|1|BA|U|2756
6ZTN|1|BA|A|2757
6ZTN|1|BA|A|2758
6ZTN|1|BA|G|2759

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B6

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BK

50S ribosomal protein L13