HL_6ZTO_074

3D structure

PDB id

6ZTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

6ZTO|1|BA|A|1453, 6ZTO|1|BA|C|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTO_074 not in the Motif Atlas

Homologous match to HL_5J7L_169

Geometric discrepancy: 0.08

The information below is about HL_5J7L_169

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_22622.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6ZTO|1|BA|C|1451
6ZTO|1|BA|G|1452
6ZTO|1|BA|A|1453
6ZTO|1|BA|C|1454
6ZTO|1|BA|G|1455
6ZTO|1|BA|G|1456
6ZTO|1|BA|U|1457
6ZTO|1|BA|U|1458
6ZTO|1|BA|G|1459

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BO

50S ribosomal protein L17