HL_6ZTO_092

3D structure

PDB id

6ZTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

6ZTO|1|BA|A|2268, 6ZTO|1|BA|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTO_092 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0635

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

6ZTO|1|BA|C|2264
6ZTO|1|BA|U|2265
6ZTO|1|BA|A|2266
6ZTO|1|BA|A|2267
6ZTO|1|BA|A|2268
6ZTO|1|BA|G|2269
6ZTO|1|BA|A|2270
6ZTO|1|BA|G|2271
6ZTO|1|BA|U|2272
6ZTO|1|BA|A|2273
6ZTO|1|BA|A|2274
6ZTO|1|BA|C|2275
6ZTO|1|BA|G|2276

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L16

Chain BX

50S ribosomal protein L27