3D structure

PDB id
6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GGUCGGACAUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZTO_093 not in the Motif Atlas
Homologous match to HL_5J7L_188
Geometric discrepancy: 0.1135
The information below is about HL_5J7L_188
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_11805.4
Basepair signature
cWW-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

6ZTO|1|BA|G|2303
6ZTO|1|BA|G|2304
6ZTO|1|BA|U|2305
6ZTO|1|BA|C|2306
6ZTO|1|BA|G|2307
6ZTO|1|BA|G|2308
6ZTO|1|BA|A|2309
6ZTO|1|BA|C|2310
6ZTO|1|BA|A|2311
6ZTO|1|BA|U|2312
6ZTO|1|BA|C|2313

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BB
5S ribosomal RNA; 5S rRNA
Chain BF
50S ribosomal protein L5

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1167 s