3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GGUAACGGC
Length
9 nucleotides
Bulged bases
6ZTP|1|AA|G|266
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZTP_006 not in the Motif Atlas
Homologous match to HL_5J7L_006
Geometric discrepancy: 0.0736
The information below is about HL_5J7L_006
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_84299.4
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

6ZTP|1|AA|G|259
6ZTP|1|AA|G|260
6ZTP|1|AA|U|261
6ZTP|1|AA|A|262
6ZTP|1|AA|A|263
6ZTP|1|AA|C|264
6ZTP|1|AA|G|265
6ZTP|1|AA|G|266
6ZTP|1|AA|C|267

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AQ
30S ribosomal protein S17
Chain AT
30S ribosomal protein S20

Coloring options:


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