HL_6ZTP_025

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

6ZTP|1|AA|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTP_025 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0594

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6ZTP|1|AA|G|1089
6ZTP|1|AA|U|1090
6ZTP|1|AA|U|1091
6ZTP|1|AA|A|1092
6ZTP|1|AA|A|1093
6ZTP|1|AA|G|1094
6ZTP|1|AA|U|1095
6ZTP|1|AA|C|1096

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AG

30S ribosomal protein S7

Chain AU

30S ribosomal protein S21