HL_6ZTP_083

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUAUUAAAAA

Length

11 nucleotides

Bulged bases

6ZTP|1|BA|A|1780, 6ZTP|1|BA|U|1781, 6ZTP|1|BA|U|1782, 6ZTP|1|BA|A|1786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTP_083 not in the Motif Atlas

Homologous match to HL_5J7L_178

Geometric discrepancy: 0.0713

The information below is about HL_5J7L_178

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01962.2

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

6ZTP|1|BA|U|1777
6ZTP|1|BA|U|1778
6ZTP|1|BA|U|1779
6ZTP|1|BA|A|1780
6ZTP|1|BA|U|1781
6ZTP|1|BA|U|1782
6ZTP|1|BA|A|1783
6ZTP|1|BA|A|1784
6ZTP|1|BA|A|1785
6ZTP|1|BA|A|1786
6ZTP|1|BA|A|1787

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BC

50S ribosomal protein L2