3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
6ZTP|1|BA|G|2751, 6ZTP|1|BA|C|2755
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZTP_104 not in the Motif Atlas
Homologous match to HL_5J7L_199
Geometric discrepancy: 0.0681
The information below is about HL_5J7L_199
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_74055.2
Basepair signature
cWW-tWH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
7

Unit IDs

6ZTP|1|BA|C|2745
6ZTP|1|BA|U|2746
6ZTP|1|BA|G|2747
6ZTP|1|BA|A|2748
6ZTP|1|BA|A|2749
6ZTP|1|BA|A|2750
6ZTP|1|BA|G|2751
6ZTP|1|BA|C|2752
6ZTP|1|BA|A|2753
6ZTP|1|BA|U|2754
6ZTP|1|BA|C|2755
6ZTP|1|BA|U|2756
6ZTP|1|BA|A|2757
6ZTP|1|BA|A|2758
6ZTP|1|BA|G|2759

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B6
50S ribosomal protein L36
Chain BG
50S ribosomal protein L6
Chain BK
50S ribosomal protein L13

Coloring options:


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