HL_6ZU1_008

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU1_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0761

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6ZU1|1|AA|A|320
6ZU1|1|AA|A|321
6ZU1|1|AA|C|322
6ZU1|1|AA|U|323
6ZU1|1|AA|G|324
6ZU1|1|AA|A|325
6ZU1|1|AA|G|326
6ZU1|1|AA|A|327
6ZU1|1|AA|C|328
6ZU1|1|AA|A|329
6ZU1|1|AA|C|330
6ZU1|1|AA|G|331
6ZU1|1|AA|G|332
6ZU1|1|AA|U|333

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20