HL_6ZU5_005

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAACAG

Length

6 nucleotides

Bulged bases

6ZU5|1|L50|A|167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_005 not in the Motif Atlas

Homologous match to HL_5TBW_002

Geometric discrepancy: 0.0975

The information below is about HL_5TBW_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6ZU5|1|L50|C|163
6ZU5|1|L50|A|164
6ZU5|1|L50|A|165
6ZU5|1|L50|C|166
6ZU5|1|L50|A|167
6ZU5|1|L50|G|168

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LII

eL36

Chain LL0

eL13

Chain LN0

eL15