RNA 3D Hub //

6ZU5 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6ZU5_0011/L50/56:63No text annotation
geometric
HL_4P5J_004
HL_08550.2
HL_6ZU5_0021/L50/74:79GNRA
geometric
HL_6JDV_001
HL_34789.4
HL_6ZU5_0031/L50/106:110No text annotation
geometric
HL_5J7L_176
NA
HL_6ZU5_0041/L50/132:139No text annotation
geometric
HL_4V9F_006
HL_48677.1
HL_6ZU5_0051/L50/163:168No text annotation
homologous
HL_5TBW_002
NA
HL_6ZU5_0061/L50/184:190No text annotation
homologous
HL_8C3A_003
NA
HL_6ZU5_0071/L50/221:225No text annotation
homologous
HL_8C3A_004
NA
HL_6ZU5_0081/L50/255:262T-loop with 2 stacked bulged bases
homologous
HL_8C3A_005
NA
HL_6ZU5_0091/L50/269:273No text annotation
homologous
HL_5TBW_006
NA
HL_6ZU5_0101/L50/277:285T-loop with unstacked turn
homologous
HL_5TBW_007
NA
HL_6ZU5_0111/L50/319:328T-loop related
homologous
HL_8P9A_120
HL_63894.2
HL_6ZU5_0121/L50/343:351Pseudoknot geometry
geometric
HL_3HHN_009
HL_30680.5
HL_6ZU5_0131/L50/395:400GNRA
homologous
HL_5TBW_010
NA
HL_6ZU5_0141/L50/408:414GNRA
geometric
HL_4LFB_012
HL_34789.4
HL_6ZU5_0151/L50/420:425GNRA
homologous
HL_8C3A_011
NA
HL_6ZU5_0161/L50/431:436GNRA
geometric
HL_5XTM_001
HL_34789.4
HL_6ZU5_0171/L50/459:462No text annotation
geometric
HL_6U8D_003
HL_32346.6
HL_6ZU5_0181/L50/472:481T-loop with 2 stacked bulged bases
homologous
HL_8C3A_014
NA
HL_6ZU5_0191/L50/512:521Mini UNCG
geometric
HL_4TUW_002
HL_12626.2
HL_6ZU5_0201/L50/528:533GNRA
homologous
HL_8C3A_016
NA
HL_6ZU5_0211/L50/598:603GNRA
homologous
HL_8C3A_019
NA
HL_6ZU5_0221/L50/630:639No text annotation
homologous
HL_5TBW_020
NA
HL_6ZU5_0231/L50/664:672No text annotation
homologous
HL_8C3A_021
NA
HL_6ZU5_0241/L50/712:717Externally structured
homologous
HL_8C3A_022
NA
HL_6ZU5_0251/L50/816:820No text annotation
HL_6ZU5_0261/L50/860:866GNRA
homologous
HL_8C3A_025
NA
HL_6ZU5_0271/L50/882:889No text annotation
homologous
HL_5TBW_026
NA
HL_6ZU5_0281/L50/1068:1072Mini UNCG
geometric
HL_5J7L_204
NA
HL_6ZU5_0291/L50/1111:1116GNRA
homologous
HL_5TBW_030
NA
HL_6ZU5_0301/L50/1168:1176T-loop with 2 stacked bulged bases
homologous
HL_8C3A_031
NA
HL_6ZU5_0311/L50/1208:1214Pseudoknot geometry with 3' bulge
homologous
HL_5TBW_032
NA
HL_6ZU5_0321/L50/1245:1252GNRA wlth tandem sheared
geometric
HL_3HHN_010
HL_98423.3
HL_6ZU5_0331/L50/1272:1281No text annotation
homologous
HL_8C3A_035
NA
HL_6ZU5_0341/L50/1300:1305GNRA
homologous
HL_5TBW_036
NA
HL_6ZU5_0351/L50/1343:1351Pseudoknot geometry
homologous
HL_8P9A_148
HL_22758.1
HL_6ZU5_0971/L50/1378:1384No text annotation
geometric
HL_5J7L_203
NA
HL_6ZU5_0371/L50/1442:1446No text annotation
homologous
HL_8C3A_040
NA
HL_6ZU5_0381/L50/1483:1490No text annotation
homologous
HL_8C3A_041
NA
HL_6ZU5_0391/L50/1500:1508GNRA with extra cWW
geometric
HL_4WF9_039
HL_87268.2
HL_6ZU5_0401/L50/1560:1565UNCG
homologous
HL_8C3A_043
NA
HL_6ZU5_0411/L50/1583:1587Mini UNCG
geometric
HL_6MSF_001
HL_90436.3
HL_6ZU5_0421/L50/1595:1599No text annotation
homologous
HL_5TBW_045
NA
HL_6ZU5_0431/L50/1620:1630No text annotation
homologous
HL_5TBW_046
NA
HL_6ZU5_0441/L50/1641:1649No text annotation
HL_6ZU5_0451/L50/1688:1695GNRA with extra cWW
geometric
HL_7A0S_056
HL_87268.2
HL_6ZU5_0461/L50/1722:1732No text annotation
homologous
HL_8C3A_049
NA
HL_6ZU5_0471/L50/1761:1769No text annotation
homologous
HL_8C3A_050
NA
HL_6ZU5_0481/L50/1838:1847No text annotation
homologous
HL_8C3A_051
NA
HL_6ZU5_0501/L50/1983:1987Mini UNCG
geometric
HL_5J7L_204
NA
HL_6ZU5_0511/L50/2013:2021No text annotation
homologous
HL_8C3A_055
NA
HL_6ZU5_0521/L50/2030:2042No text annotation
homologous
HL_5TBW_055
NA
HL_6ZU5_0981/L50/2070:2078No text annotation
geometric
HL_5J7L_219
NA
HL_6ZU5_0531/L50/2074:2077No text annotation
geometric
HL_4KR9_003
HL_16651.1
HL_6ZU5_0541/L50/2090:2097Pseudoknot geometry
homologous
HL_5TBW_057
NA
HL_6ZU5_0551/L50/2120:2125GNRA
geometric
HL_4QLM_001
HL_34789.4
HL_6ZU5_0561/L50/2136:2141GNRA
homologous
HL_8C3A_060
NA
HL_6ZU5_0571/L50/2167:2175Pseudoknot geometry with 3' bulge
geometric
HL_5J7L_170
NA
HL_6ZU5_0581/L50/2231:2239No text annotation
homologous
HL_5TBW_061
NA
HL_6ZU5_0591/L50/2288:2295No text annotation
homologous
HL_8C3A_063
NA
HL_6ZU5_0601/L50/2311:2317No text annotation
homologous
HL_5TBW_063
NA
HL_6ZU5_0611/L50/2354:2359GNRA
homologous
HL_5TBW_064
NA
HL_6ZU5_0621/L50/2414:2419GNRA
homologous
HL_8C3A_066
NA
HL_6ZU5_0631/L50/2455:2460Ribsomal LSU H95
homologous
HL_8C3A_067
NA
HL_6ZU5_0651/L50/2558:2566No text annotation
homologous
HL_8C3A_071
NA
HL_6ZU5_0991/L70/32:45No text annotation
homologous
HL_8C3A_228
NA
HL_6ZU5_0671/L70/36:41No text annotation
homologous
HL_5TBW_185
NA
HL_6ZU5_0681/L70/86:91GNRA
homologous
HL_5TBW_186
NA
HL_6ZU5_0691/S60/7:17No text annotation
HL_6ZU5_0701/S60/136:141No text annotation
HL_6ZU5_0711/S60/172:179No text annotation
HL_6ZU5_0721/S60/194:199No text annotation
HL_6ZU5_0731/S60/239:247No text annotation
HL_6ZU5_0741/S60/277:282No text annotation
HL_6ZU5_0751/S60/302:313No text annotation
HL_6ZU5_0761/S60/323:328No text annotation
HL_6ZU5_0771/S60/359:364No text annotation
HL_6ZU5_0781/S60/400:412No text annotation
HL_6ZU5_0791/S60/445:450No text annotation
HL_6ZU5_0801/S60/538:548No text annotation
HL_6ZU5_0811/S60/611:620No text annotation
HL_6ZU5_0821/S60/648:653No text annotation
HL_6ZU5_0831/S60/708:718No text annotation
HL_6ZU5_0841/S60/759:764No text annotation
HL_6ZU5_0851/S60/777:782No text annotation
HL_6ZU5_0861/S60/814:819No text annotation
HL_6ZU5_0871/S60/881:890No text annotation
HL_6ZU5_0881/S60/986:991No text annotation
HL_6ZU5_0891/S60/999:1006No text annotation
HL_6ZU5_0911/S60/1055:1061No text annotation
HL_6ZU5_0921/S60/1151:1156No text annotation
HL_6ZU5_0931/S60/1193:1200No text annotation
HL_6ZU5_0941/S60/1233:1243No text annotation
HL_6ZU5_0951/S60/1317:1323No text annotation
HL_6ZU5_0961/S60/1378:1383No text annotation

Problematic loops

#loop idProblemSequence
HL_6ZU5_036No text annotation
HL_6ZU5_049No text annotation
HL_6ZU5_064No text annotation
HL_6ZU5_066Mini UNCG
HL_6ZU5_090No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6ZU5_0011/L50/14:20,
1/L50/438:444		Triple sheared with non-canonical cWW
homologous
IL_8C3A_016
NA
IL_6ZU5_0021/L50/26:27,
1/L50/375:377		Single bulged A
homologous
IL_8C3A_014
NA
IL_6ZU5_0031/L50/32:34,
1/L50/367:370		Minor groove platform with extra cWW
geometric
IL_7RQB_031
NA
IL_6ZU5_1641/L50/45:65,
1/L50/91:95		No text annotation
IL_6ZU5_0041/L50/69:73,
1/L50/80:87		Kink-turn
geometric
IL_5G4U_006
NA
IL_6ZU5_0051/L50/121:122,
1/L50/150:152		Single stack bend
homologous
IL_5TBW_004
NA
IL_6ZU5_0061/L50/126:132,
1/L50/139:146		8x7 Sarcin-Ricin; G-bulge
geometric
IL_4V9F_006
IL_62167.3
IL_6ZU5_0071/L50/176:183,
1/L50/191:197		No text annotation
homologous
IL_8C3A_006
NA
IL_6ZU5_0081/L50/216:217,
1/L50/229:234		No text annotation
homologous
IL_5TBW_007
NA
IL_6ZU5_0091/L50/242:246,
1/L50/292:294		No text annotation
IL_6ZU5_0101/L50/415:417,
1/L50/428:429		Major groove platform
geometric
IL_7A0S_085
IL_48076.8
IL_6ZU5_0111/L50/557:559,
1/L50/692:694		Isolated non-canonical cWW pair
homologous
IL_8C3A_029
NA
IL_6ZU5_0121/L50/559:563,
1/L50/685:692		tHW-tHW cross-strand stack
geometric
IL_5TBW_028
NA
IL_6ZU5_0131/L50/582:583,
1/L50/649:651		Single bulged A
geometric
IL_5J7L_261
NA
IL_6ZU5_0141/L50/587:588,
1/L50/613:615		Single bulged G
homologous
IL_8C3A_032
NA
IL_6ZU5_0151/L50/588:592,
1/L50/609:613		Triple sheared
geometric
IL_4V9F_027
IL_15190.2
IL_6ZU5_0161/L50/594:596,
1/L50/605:607		Isolated non-canonical cWW pair
geometric
IL_4LFB_061
NA
IL_6ZU5_0171/L50/623:626,
1/L50/642:644		Major groove platform with extra cWW
homologous
IL_5TBW_031
NA
IL_6ZU5_0181/L50/627:629,
1/L50/640:641		Single bulged U
homologous
IL_8C3A_035
NA
IL_6ZU5_0191/L50/661:663,
1/L50/673:677		Multiple bulged bases
geometric
IL_7A0S_021
IL_89509.1
IL_6ZU5_0201/L50/723:724,
1/L50/845:847		Single stack bend
homologous
IL_5TBW_035
NA
IL_6ZU5_0211/L50/731:733,
1/L50/837:838		No text annotation
IL_6ZU5_0221/L50/735:737,
1/L50/834:835		Single bulged G
geometric
IL_5TBW_037
NA
IL_6ZU5_0231/L50/745:749,
1/L50/794:798		5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_4V9F_033
IL_38862.5
IL_6ZU5_0241/L50/749:750,
1/L50/792:794		Minor groove platform
homologous
IL_8C3A_042
NA
IL_6ZU5_0251/L50/751:755,
1/L50/788:791		C-loop
homologous
IL_5TBW_040
NA
IL_6ZU5_0261/L50/757:759,
1/L50/784:786		Isolated non-canonical cWW pair
geometric
IL_5TBW_115
NA
IL_6ZU5_0271/L50/759:762,
1/L50/781:784		Tandem non-canonical cWW pairs
geometric
IL_5LQO_002
IL_15225.2
IL_6ZU5_0281/L50/764:766,
1/L50/778:779		Single bulged U
geometric
IL_6UFG_004
IL_97561.5
IL_6ZU5_0291/L50/814:816,
1/L50/820:821		Single bulged A
homologous
IL_5TBW_045
NA
IL_6ZU5_0301/L50/854:856,
1/L50/870:872		Isolated non-canonical cWW pair
homologous
IL_8C3A_049
NA
IL_6ZU5_0311/L50/901:905,
1/L50/1054:1058		UAA/GAN
homologous
IL_5TBW_048
NA
IL_6ZU5_0321/L50/907:914,
1/L50/1051:1052		SSU/LSU pseudoknot
homologous
IL_8C3A_052
NA
IL_6ZU5_0331/L50/920:926,
1/L50/1041:1045		No text annotation
IL_6ZU5_0341/L50/926:932,
1/L50/1026:1041		No text annotation
geometric
IL_7RQB_040
NA
IL_6ZU5_0351/L50/934:936,
1/L50/1023:1024		Single bulged U
homologous
IL_8C3A_056
NA
IL_6ZU5_0361/L50/1086:1088,
1/L50/1136:1139		Isolated cWS basepair
homologous
IL_5TBW_057
NA
IL_6ZU5_0371/L50/1090:1092,
1/L50/1132:1134		Isolated non-canonical cWW pair
geometric
IL_4P3T_001
NA
IL_6ZU5_0381/L50/1093:1095,
1/L50/1129:1131		Isolated non-canonical cWW pair
geometric
IL_6OL3_002
IL_01003.4
IL_6ZU5_0391/L50/1097:1104,
1/L50/1123:1127		Kink-turn
homologous
IL_5TBW_059
NA
IL_6ZU5_0401/L50/1152:1158,
1/L50/1823:1828		7x6 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_061
NA
IL_6ZU5_0411/L50/1194:1197,
1/L50/1476:1477		Major groove platform; stack outside cWW
geometric
IL_4V9F_050
IL_74641.2
IL_6ZU5_0421/L50/1203:1207,
1/L50/1215:1217		No text annotation
IL_6ZU5_0431/L50/1235:1239,
1/L50/1258:1263		UAA/GAN
homologous
IL_5TBW_063
NA
IL_6ZU5_0441/L50/1240:1243,
1/L50/1254:1257		No text annotation
IL_6ZU5_0451/L50/1323:1325,
1/L50/1438:1439		Single stack bend
geometric
IL_7RQB_058
NA
IL_6ZU5_0461/L50/1326:1327,
1/L50/1435:1437		Single stack bend
geometric
IL_5J7L_269
NA
IL_6ZU5_0471/L50/1328:1331,
1/L50/1431:1434		Double sheared
geometric
IL_4V88_468
NA
IL_6ZU5_0481/L50/1365:1368,
1/L50/1397:1401		No text annotation
IL_6ZU5_1661/L50/1365:1370,
1/L50/1395:1401		No text annotation
homologous
IL_8P9A_300
IL_00680.1
IL_6ZU5_0491/L50/1368:1370,
1/L50/1395:1397		Isolated non-canonical cWW pair
geometric
IL_1U9S_007
IL_01003.4
IL_6ZU5_0501/L50/1373:1377,
1/L50/1385:1392		Kink-turn
geometric
IL_4CS1_002
NA
IL_6ZU5_0511/L50/1520:1526,
1/L50/1815:1818		No text annotation
homologous
IL_5TBW_074
NA
IL_6ZU5_0521/L50/1531:1534,
1/L50/1807:1810		No text annotation
IL_6ZU5_0531/L50/1535:1538,
1/L50/1805:1806		Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_6ZU5_1671/L50/1535:1543,
1/L50/1802:1806		No text annotation
homologous
IL_8C3A_484
NA
IL_6ZU5_0541/L50/1538:1543,
1/L50/1802:1805		No text annotation
homologous
IL_8C3A_083
NA
IL_6ZU5_0551/L50/1555:1560,
1/L50/1565:1571		tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_20700.1
IL_6ZU5_0561/L50/1613:1614,
1/L50/1792:1794		Single bulged A
homologous
IL_8C3A_087
NA
IL_6ZU5_0571/L50/1665:1668,
1/L50/1714:1715		Major groove intercalation
homologous
IL_5TBW_084
NA
IL_6ZU5_0581/L50/1669:1670,
1/L50/1710:1713		Major groove intercalation
homologous
IL_5TBW_085
NA
IL_6ZU5_0601/L50/1680:1686,
1/L50/1697:1703		No text annotation
homologous
IL_5TBW_088
NA
IL_6ZU5_0611/L50/1745:1746,
1/L50/1776:1779		Bulged stacked bases
geometric
IL_5TBW_089
NA
IL_6ZU5_0621/L50/1746:1757,
1/L50/1773:1776		No text annotation
homologous
IL_5TBW_090
NA
IL_6ZU5_0631/L50/1860:1863,
1/L50/2377:2379		Major groove platform with extra pair
homologous
IL_5TBW_091
NA
IL_6ZU5_0641/L50/1865:1867,
1/L50/2372:2375		No text annotation
homologous
IL_8C3A_097
NA
IL_6ZU5_0651/L50/1878:1880,
1/L50/2202:2203		Single bulged U
homologous
IL_8C3A_098
NA
IL_6ZU5_0661/L50/1881:1882,
1/L50/2198:2201		Minor groove platform
homologous
IL_5TBW_094
NA
IL_6ZU5_0671/L50/1892:1894,
1/L50/2001:2004		No text annotation
homologous
IL_8C3A_100
NA
IL_6ZU5_0681/L50/1895:1897,
1/L50/1998:2000		Isolated cWH basepair
geometric
IL_3CZW_002
NA
IL_6ZU5_0691/L50/2011:2012,
1/L50/2022:2024		No text annotation
IL_6ZU5_0701/L50/2063:2065,
1/L50/2083:2087		Isolated tHS basepair with bulges
geometric
IL_5TBW_099
NA
IL_6ZU5_0711/L50/2070:2074,
1/L50/2077:2078		No text annotation
IL_6ZU5_0721/L50/2111:2113,
1/L50/2132:2133		Single bulged A
geometric
IL_5WWT_001
IL_14190.2
IL_6ZU5_0731/L50/2163:2165,
1/L50/2177:2178		Single bulged C
geometric
IL_3SNP_003
IL_05642.3
IL_6ZU5_0741/L50/2214:2217,
1/L50/2254:2258		No text annotation
homologous
IL_8C3A_111
NA
IL_6ZU5_0751/L50/2217:2219,
1/L50/2253:2254		Major groove platform
geometric
IL_4V9F_083
IL_46637.2
IL_6ZU5_0761/L50/2219:2221,
1/L50/2249:2253		Major groove minor groove platform with extra cWW
geometric
IL_4V9F_084
IL_36931.2
IL_6ZU5_0771/L50/2226:2230,
1/L50/2240:2244		No text annotation
homologous
IL_8C3A_114
NA
IL_6ZU5_0781/L50/2267:2268,
1/L50/2340:2342		Major groove platform
homologous
IL_5TBW_107
NA
IL_6ZU5_0791/L50/2270:2272,
1/L50/2334:2338		Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA
IL_6ZU5_0801/L50/2272:2273,
1/L50/2331:2334		Multiple bulged bases
homologous
IL_5TBW_109
NA
IL_6ZU5_0811/L50/2282:2283,
1/L50/2300:2303		Major groove platform with intercalation
homologous
IL_5TBW_111
NA
IL_6ZU5_0821/L50/2309:2311,
1/L50/2317:2319		Isolated non-canonical cWW pair
geometric
IL_5TBW_112
NA
IL_6ZU5_0831/L50/2351:2352,
1/L50/2361:2363		No text annotation
IL_6ZU5_0841/L50/2394:2396,
1/L50/2524:2526		Isolated non-canonical cWW pair
geometric
IL_7A0S_107
IL_71625.3
IL_6ZU5_0851/L50/2408:2414,
1/L50/2419:2424		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_4V9F_092
IL_02666.1
IL_6ZU5_0861/L50/2436:2440,
1/L50/2476:2478		C-loop
geometric
IL_7RQB_104
NA
IL_6ZU5_0871/L50/2443:2446,
1/L50/2469:2473		UAA/GAN related
homologous
IL_8C3A_127
NA
IL_6ZU5_0881/L50/2487:2492,
1/L50/2512:2517		UAA/GAN with extra cWW
geometric
IL_5J7L_350
NA
IL_6ZU5_0891/L50/2577:2578,
1/L50/2623:2625		Single bulged U
homologous
IL_8C3A_137
NA
IL_6ZU5_0901/L50/2581:2583,
1/L50/2617:2620		Isolated non-canonical cWW with bulges
geometric
IL_4PKD_001
IL_68118.4
IL_6ZU5_0911/L50/2585:2590,
1/L50/2611:2615		No text annotation
homologous
IL_8C3A_139
NA
IL_6ZU5_0921/L50/2595:2598,
1/L50/2604:2607		Double sheared; A in syn
homologous
IL_8C3A_141
NA
IL_6ZU5_0931/L70/15:16,
1/L70/62:64		Single bulged A
homologous
IL_5TBW_372
NA
IL_6ZU5_0941/L70/20:27,
1/L70/52:58		No text annotation
homologous
IL_4WF9_113
IL_19048.1
IL_6ZU5_0951/L70/28:29,
1/L70/48:51		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_357
NA
IL_6ZU5_0961/L70/32:36,
1/L70/41:45		Symmetric double minor groove platform
geometric
IL_4V9F_104
IL_58103.12
IL_6ZU5_0971/L70/71:78,
1/L70/98:104		8x7 Sarcin-Ricin; G-bulge
geometric
IL_7A0S_007
IL_62167.3
IL_6ZU5_0981/L70/79:81,
1/L70/95:97		Isolated non-canonical cWW pair
geometric
IL_4V88_470
NA
IL_6ZU5_0991/L70/82:85,
1/L70/92:94		Isolated non-canonical cWW pair
homologous
IL_5TBW_378
NA
IL_6ZU5_1001/S60/38:39,
1/S60/375:377		No text annotation
IL_6ZU5_1011/S60/41:47,
1/S60/340:342		No text annotation
IL_6ZU5_1021/S60/49:51,
1/S60/337:338		No text annotation
IL_6ZU5_1031/S60/58:60,
1/S60/76:77		No text annotation
IL_6ZU5_1041/S60/61:65,
1/S60/71:75		No text annotation
IL_6ZU5_1051/S60/102:105,
1/S60/211:212		No text annotation
IL_6ZU5_1061/S60/107:110,
1/S60/207:209		No text annotation
IL_6ZU5_1071/S60/125:131,
1/S60/146:153		No text annotation
IL_6ZU5_1081/S60/166:169,
1/S60/182:184		No text annotation
IL_6ZU5_1091/S60/192:194,
1/S60/199:200		No text annotation
IL_6ZU5_1101/S60/222:227,
1/S60/257:264		No text annotation
IL_6ZU5_1111/S60/229:232,
1/S60/254:255		No text annotation
IL_6ZU5_1121/S60/272:274,
1/S60/285:290		No text annotation
IL_6ZU5_1131/S60/348:350,
1/S60/371:372		No text annotation
IL_6ZU5_1141/S60/352:356,
1/S60/368:369		No text annotation
IL_6ZU5_1151/S60/356:357,
1/S60/366:368		No text annotation
IL_6ZU5_1161/S60/426:433,
1/S60/463:464		No text annotation
IL_6ZU5_1171/S60/433:435,
1/S60/462:463		No text annotation
IL_6ZU5_1191/S60/492:498,
1/S60/797:798		No text annotation
IL_6ZU5_1201/S60/503:507,
1/S60/679:683		No text annotation
IL_6ZU5_1221/S60/520:522,
1/S60/562:565		No text annotation
IL_6ZU5_1231/S60/526:528,
1/S60/555:558		No text annotation
IL_6ZU5_1241/S60/528:533,
1/S60/553:555		No text annotation
IL_6ZU5_1251/S60/536:538,
1/S60/548:550		No text annotation
IL_6ZU5_1261/S60/576:577,
1/S60/673:676		No text annotation
IL_6ZU5_1271/S60/579:580,
1/S60/669:671		No text annotation
IL_6ZU5_1281/S60/582:585,
1/S60/664:667		No text annotation
IL_6ZU5_1291/S60/585:588,
1/S60/662:664		No text annotation
IL_6ZU5_1681/S60/596:599,
1/S60/635:638		No text annotation
IL_6ZU5_1311/S60/602:604,
1/S60/630:632		No text annotation
IL_6ZU5_1321/S60/606:610,
1/S60/621:628		No text annotation
IL_6ZU5_1331/S60/696:701,
1/S60/725:727		No text annotation
IL_6ZU5_1341/S60/701:705,
1/S60/721:725		No text annotation
IL_6ZU5_1351/S60/745:747,
1/S60/788:794		No text annotation
IL_6ZU5_1361/S60/754:756,
1/S60/767:769		No text annotation
IL_6ZU5_1371/S60/803:812,
1/S60/821:828		No text annotation
IL_6ZU5_1381/S60/839:840,
1/S60/1270:1272		No text annotation
IL_6ZU5_1391/S60/842:844,
1/S60/1267:1268		No text annotation
IL_6ZU5_1401/S60/850:853,
1/S60/1257:1261		No text annotation
IL_6ZU5_1411/S60/871:872,
1/S60/1116:1118		No text annotation
IL_6ZU5_1421/S60/958:960,
1/S60/1097:1098		No text annotation
IL_6ZU5_1691/S60/962:966,
1/S60/1093:1095		No text annotation
IL_6ZU5_1701/S60/962:968,
1/S60/1087:1095		No text annotation
IL_6ZU5_1441/S60/966:968,
1/S60/1087:1093		No text annotation
IL_6ZU5_1451/S60/970:971,
1/S60/1083:1085		No text annotation
IL_6ZU5_1461/S60/979:981,
1/S60/1014:1016		No text annotation
IL_6ZU5_1471/S60/996:998,
1/S60/1007:1008		No text annotation
IL_6ZU5_1481/S60/1048:1051,
1/S60/1065:1071		No text annotation
IL_6ZU5_1491/S60/1131:1133,
1/S60/1173:1175		No text annotation
IL_6ZU5_1501/S60/1138:1143,
1/S60/1164:1168		No text annotation
IL_6ZU5_1511/S60/1143:1147,
1/S60/1160:1164		No text annotation
IL_6ZU5_1521/S60/1182:1187,
1/S60/1206:1211		No text annotation
IL_6ZU5_1531/S60/1189:1191,
1/S60/1202:1204		No text annotation
IL_6ZU5_1541/S60/1276:1278,
1/S60/1364:1367		No text annotation
IL_6ZU5_1551/S60/1278:1281,
1/S60/1360:1364		No text annotation
IL_6ZU5_1561/S60/1282:1284,
1/S60/1357:1359		No text annotation
IL_6ZU5_1571/S60/1284:1287,
1/S60/1353:1357		No text annotation
IL_6ZU5_1581/S60/1291:1293,
1/S60/1347:1349		No text annotation
IL_6ZU5_1591/S60/1293:1296,
1/S60/1344:1347		No text annotation
IL_6ZU5_1601/S60/1298:1300,
1/S60/1340:1342		No text annotation
IL_6ZU5_1611/S60/1308:1311,
1/S60/1329:1332		No text annotation
IL_6ZU5_1621/S60/1312:1315,
1/S60/1325:1328		No text annotation
IL_6ZU5_1631/S60/1372:1374,
1/S60/1387:1389		No text annotation

Problematic loops

#loop idProblemSequence
IL_6ZU5_165No text annotation
IL_6ZU5_059No text annotation
IL_6ZU5_118No text annotation
IL_6ZU5_121No text annotation
IL_6ZU5_130No text annotation
IL_6ZU5_143No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6ZU5_0291/L50/22:25,
1/L50/378:394,
1/L50/401:406		No text annotation
geometric
J3_5TBW_061
NA
J3_6ZU5_0011/L50/36:43,
1/L50/97:102,
1/L50/114:116		No text annotation
J3_6ZU5_0021/L50/45:56,
1/L50/63:65,
1/L50/91:95		No text annotation
geometric
J3_4WF9_001
J3_47707.1
J3_6ZU5_0301/L50/207:216,
1/L50/234:239,
1/L50/297:308		No text annotation
J3_6ZU5_0311/L50/207:217,
1/L50/229:239,
1/L50/297:308		No text annotation
J3_6ZU5_0321/L50/247:251,
1/L50/266:275,
1/L50/287:291		No text annotation
geometric
J3_8VTW_041
NA
J3_6ZU5_0331/L50/507:510,
1/L50/523:527,
1/L50/534:541		No text annotation
J3_6ZU5_0031/L50/568:574,
1/L50/659:661,
1/L50/677:680		No text annotation
homologous
J3_8C3A_003
NA
J3_6ZU5_0041/L50/583:585,
1/L50/617:621,
1/L50/646:649		No text annotation
homologous
J3_8C3A_004
NA
J3_6ZU5_0051/L50/738:739,
1/L50/804:806,
1/L50/829:833		No text annotation
J3_6ZU5_0061/L50/1185:1187,
1/L50/1496:1498,
1/L50/1510:1513		No text annotation
J3_6ZU5_0071/L50/1190:1193,
1/L50/1478:1482,
1/L50/1491:1493		No text annotation
J3_6ZU5_0081/L50/1228:1234,
1/L50/1264:1268,
1/L50/1285:1286		No text annotation
homologous
J3_5TBW_010
NA
J3_6ZU5_0091/L50/1293:1298,
1/L50/1307:1311,
1/L50/1459:1465		No text annotation
J3_6ZU5_0341/L50/1318:1321,
1/L50/1441:1442,
1/L50/1446:1452		No text annotation
J3_6ZU5_0111/L50/1901:1904,
1/L50/1978:1982,
1/L50/1988:1994		No text annotation
J3_6ZU5_0121/L50/2048:2050,
1/L50/2146:2157,
1/L50/2184:2189		No text annotation
homologous
J3_8C3A_056
NA
J3_6ZU5_0131/L50/2061:2063,
1/L50/2087:2089,
1/L50/2098:2103		No text annotation
homologous
J3_5TBW_013
NA
J3_6ZU5_0141/L50/2277:2280,
1/L50/2305:2307,
1/L50/2321:2327		No text annotation
homologous
J3_5TBW_014
NA
J3_6ZU5_0151/L50/2553:2554,
1/L50/2570:2573,
1/L50/2629:2632		No text annotation
J3_6ZU5_0161/L70/9:14,
1/L70/65:66,
1/L70/109:110		No text annotation
homologous
J3_5TBW_045
NA
J3_6ZU5_0171/S60/40:41,
1/S60/342:348,
1/S60/372:374		No text annotation
J3_6ZU5_0351/S60/40:47,
1/S60/340:348,
1/S60/372:374		No text annotation
J3_6ZU5_0181/S60/509:511,
1/S60/572:576,
1/S60/676:677		No text annotation
J3_6ZU5_0361/S60/509:511,
1/S60/572:577,
1/S60/673:677		No text annotation
J3_6ZU5_0191/S60/594:596,
1/S60/638:647,
1/S60/654:656		No text annotation
J3_6ZU5_0201/S60/748:750,
1/S60/773:776,
1/S60/783:787		No text annotation
J3_6ZU5_0211/S60/854:857,
1/S60/1221:1227,
1/S60/1249:1256		No text annotation
J3_6ZU5_0221/S60/861:864,
1/S60/1125:1127,
1/S60/1214:1217		No text annotation
J3_6ZU5_0231/S60/873:880,
1/S60/891:902,
1/S60/1111:1115		No text annotation
J3_6ZU5_0241/S60/908:913,
1/S60/953:956,
1/S60/1100:1105		No text annotation
J3_6ZU5_0381/S60/973:978,
1/S60/1017:1022,
1/S60/1076:1081		No text annotation
J3_6ZU5_0261/S60/983:984,
1/S60/993:996,
1/S60/1008:1012		No text annotation
J3_6ZU5_0271/S60/1025:1028,
1/S60/1045:1048,
1/S60/1071:1073		No text annotation
J3_6ZU5_0371/S60/1025:1028,
1/S60/1045:1051,
1/S60/1065:1073		No text annotation
J3_6ZU5_0281/S60/1127:1131,
1/S60/1175:1182,
1/S60/1211:1214		No text annotation
J4_6ZU5_0011/L50/206:207,
1/L50/308:313,
1/L50/334:339,
1/L50/355:358		No text annotation
homologous
J4_8C3A_001
NA
J4_6ZU5_0021/L50/247:251,
1/L50/266:269,
1/L50/273:275,
1/L50/287:291		No text annotation
J4_6ZU5_0031/L50/1159:1163,
1/L50/1181:1182,
1/L50/1516:1518,
1/L50/1820:1822		No text annotation
J4_6ZU5_0041/L50/1194:1198,
1/L50/1222:1227,
1/L50/1287:1288,
1/L50/1470:1477		No text annotation
J4_6ZU5_0051/L50/1197:1198,
1/L50/1222:1227,
1/L50/1287:1288,
1/L50/1470:1476		No text annotation
J4_6ZU5_0061/L50/1615:1619,
1/L50/1631:1635,
1/L50/1655:1659,
1/L50/1786:1791		No text annotation
homologous
J4_8C3A_006
NA
J4_6ZU5_0071/L50/1661:1663,
1/L50/1717:1718,
1/L50/1736:1745,
1/L50/1779:1784		No text annotation
homologous
J4_8C3A_007
NA
J4_6ZU5_0081/L50/2051:2055,
1/L50/2109:2111,
1/L50/2133:2134,
1/L50/2143:2145		No text annotation
J4_6ZU5_0091/L50/2051:2055,
1/L50/2109:2113,
1/L50/2132:2134,
1/L50/2143:2145		No text annotation
homologous
J4_8C3A_008
NA
J4_6ZU5_0101/L50/2398:2401,
1/L50/2431:2432,
1/L50/2482:2485,
1/L50/2519:2522		No text annotation
J4_6ZU5_0111/S60/88:96,
1/S60/218:220,
1/S60/266:270,
1/S60/292:293		No text annotation
J4_6ZU5_0121/S60/116:125,
1/S60/153:162,
1/S60/188:192,
1/S60/200:201		No text annotation
J4_6ZU5_0131/S60/116:125,
1/S60/153:162,
1/S60/188:194,
1/S60/199:201		No text annotation
J4_6ZU5_0141/S60/498:500,
1/S60/686:691,
1/S60/732:743,
1/S60/796:797		No text annotation
J5_6ZU5_0011/L50/20:21,
1/L50/407:408,
1/L50/414:415,
1/L50/429:431,
1/L50/436:438		No text annotation
J5_6ZU5_0021/L50/490:495,
1/L50/553:556,
1/L50/695:698,
1/L50/1085:1086,
1/L50/1139:1145		No text annotation
homologous
J5_8P9A_011
J5_08384.1
J5_6ZU5_0031/L50/1543:1551,
1/L50/1575:1576,
1/L50/1594:1595,
1/L50/1599:1607,
1/L50/1800:1802		No text annotation
homologous
J5_8C3A_004
NA
J5_6ZU5_0041/L50/1868:1875,
1/L50/2206:2214,
1/L50/2258:2267,
1/L50/2342:2348,
1/L50/2366:2371		No text annotation
J5_6ZU5_0051/L50/1885:1888,
1/L50/2008:2011,
1/L50/2024:2025,
1/L50/2047:2048,
1/L50/2189:2195		No text annotation
homologous
J5_8C3A_006
NA
J5_6ZU5_0061/S60/53:56,
1/S60/79:86,
1/S60/295:297,
1/S60/318:320,
1/S60/331:335		No text annotation
J6_6ZU5_0011/L50/34:36,
1/L50/116:121,
1/L50/152:162,
1/L50/169:173,
1/L50/200:204,
1/L50/360:367		No text annotation
J6_6ZU5_0021/L50/1885:1888,
1/L50/2008:2011,
1/L50/2024:2025,
1/L50/2047:2050,
1/L50/2146:2157,
1/L50/2184:2195		No text annotation
J7_6ZU5_0011/L50/4:6,
1/L50/452:454,
1/L50/467:469,
1/L50/484:485,
1/L50/1150:1151,
1/L50/1829:1833,
1/L50/1852:1856		No text annotation
J7_6ZU5_0021/L50/703:708,
1/L50/721:722,
1/L50/848:851,
1/L50/875:880,
1/L50/891:895,
1/L50/1064:1065,
1/L50/1075:1080		No text annotation

Problematic loops

#loop idProblemSequence
J3_6ZU5_010No text annotation
J3_6ZU5_025No text annotation

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