HL_6ZU5_006

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_006 not in the Motif Atlas

Homologous match to HL_8C3A_003

Geometric discrepancy: 0.0866

The information below is about HL_8C3A_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67216.9

Basepair signature

cWW-cWW-F-tSH

Number of instances in this motif group

9

Unit IDs

6ZU5|1|L50|C|184
6ZU5|1|L50|G|185
6ZU5|1|L50|G|186
6ZU5|1|L50|C|187
6ZU5|1|L50|G|188
6ZU5|1|L50|A|189
6ZU5|1|L50|G|190

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LL0

eL13

Chain LOO

eL42

Chain LQ0

eL18