HL_6ZU5_013

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_013 not in the Motif Atlas

Homologous match to HL_5TBW_010

Geometric discrepancy: 0.1124

The information below is about HL_5TBW_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6ZU5|1|L50|C|395
6ZU5|1|L50|G|396
6ZU5|1|L50|C|397
6ZU5|1|L50|G|398
6ZU5|1|L50|A|399
6ZU5|1|L50|G|400

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LC0

uL4

Chain LJJ

eL37

Chain LLL

eL39