HL_6ZU5_014

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_014 not in the Motif Atlas

Geometric match to HL_4LFB_012

Geometric discrepancy: 0.3218

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6ZU5|1|L50|C|408
6ZU5|1|L50|G|409
6ZU5|1|L50|A|410
6ZU5|1|L50|C|411
6ZU5|1|L50|G|412
6ZU5|1|L50|A|413
6ZU5|1|L50|G|414

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LLL

eL39

Chain LY0

uL24