HL_6ZU5_016

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_016 not in the Motif Atlas

Geometric match to HL_5XTM_001

Geometric discrepancy: 0.1232

The information below is about HL_5XTM_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6ZU5|1|L50|C|431
6ZU5|1|L50|G|432
6ZU5|1|L50|A|433
6ZU5|1|L50|A|434
6ZU5|1|L50|A|435
6ZU5|1|L50|G|436

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LP0

uL22

Chain LY0

uL24