HL_6ZU5_019
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCGCUCCGCG
- Length
- 10 nucleotides
- Bulged bases
- 6ZU5|1|L50|C|517, 6ZU5|1|L50|C|518, 6ZU5|1|L50|C|520
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZU5_019 not in the Motif Atlas
- Geometric match to HL_4TUW_002
- Geometric discrepancy: 0.1809
- The information below is about HL_4TUW_002
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_12626.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 17
Unit IDs
6ZU5|1|L50|C|512
6ZU5|1|L50|C|513
6ZU5|1|L50|G|514
6ZU5|1|L50|C|515
6ZU5|1|L50|U|516
6ZU5|1|L50|C|517
6ZU5|1|L50|C|518
6ZU5|1|L50|G|519
6ZU5|1|L50|C|520
6ZU5|1|L50|G|521
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LAA
- uL15
- Chain LC0
- uL4
- Chain LL0
- eL13
- Chain LN0
- eL15
- Chain LQ0
- eL18
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