HL_6ZU5_020

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_020 not in the Motif Atlas

Homologous match to HL_8C3A_016

Geometric discrepancy: 0.136

The information below is about HL_8C3A_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6ZU5|1|L50|C|528
6ZU5|1|L50|G|529
6ZU5|1|L50|A|530
6ZU5|1|L50|A|531
6ZU5|1|L50|G|532
6ZU5|1|L50|G|533

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LII

eL36

Chain LQ0

eL18