HL_6ZU5_029

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUGCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_029 not in the Motif Atlas

Homologous match to HL_5TBW_030

Geometric discrepancy: 0.1958

The information below is about HL_5TBW_030

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6ZU5|1|L50|C|1111
6ZU5|1|L50|G|1112
6ZU5|1|L50|U|1113
6ZU5|1|L50|G|1114
6ZU5|1|L50|C|1115
6ZU5|1|L50|G|1116

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LE0

eL6

Chain LEE

eL32