HL_6ZU5_037

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCGUG

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|C|1443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_037 not in the Motif Atlas

Homologous match to HL_8C3A_040

Geometric discrepancy: 0.1039

The information below is about HL_8C3A_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

6ZU5|1|L50|C|1442
6ZU5|1|L50|C|1443
6ZU5|1|L50|G|1444
6ZU5|1|L50|U|1445
6ZU5|1|L50|G|1446

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2

Chain LPP

eL43