HL_6ZU5_048

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

6ZU5|1|L50|A|1841, 6ZU5|1|L50|A|1842, 6ZU5|1|L50|C|1843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_048 not in the Motif Atlas

Homologous match to HL_8C3A_051

Geometric discrepancy: 0.0964

The information below is about HL_8C3A_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZU5|1|L50|G|1838
6ZU5|1|L50|G|1839
6ZU5|1|L50|G|1840
6ZU5|1|L50|A|1841
6ZU5|1|L50|A|1842
6ZU5|1|L50|C|1843
6ZU5|1|L50|G|1844
6ZU5|1|L50|G|1845
6ZU5|1|L50|G|1846
6ZU5|1|L50|C|1847

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LEE

eL32