HL_6ZU5_051

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

6ZU5|1|L50|G|2015

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_051 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.0986

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

6ZU5|1|L50|C|2013
6ZU5|1|L50|U|2014
6ZU5|1|L50|G|2015
6ZU5|1|L50|G|2016
6ZU5|1|L50|G|2017
6ZU5|1|L50|G|2018
6ZU5|1|L50|C|2019
6ZU5|1|L50|G|2020
6ZU5|1|L50|G|2021

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LBB

eL29

Chain LI0

uL16