HL_6ZU5_056

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_056 not in the Motif Atlas

Homologous match to HL_8C3A_060

Geometric discrepancy: 0.1321

The information below is about HL_8C3A_060

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6ZU5|1|L50|G|2136
6ZU5|1|L50|G|2137
6ZU5|1|L50|A|2138
6ZU5|1|L50|A|2139
6ZU5|1|L50|A|2140
6ZU5|1|L50|C|2141

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LD0

uL18

Chain LT0

eL21