HL_6ZU5_065

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACCACGAC

Length

9 nucleotides

Bulged bases

6ZU5|1|L50|A|2559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_065 not in the Motif Atlas

Homologous match to HL_8C3A_071

Geometric discrepancy: 0.0885

The information below is about HL_8C3A_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

6ZU5|1|L50|G|2558
6ZU5|1|L50|A|2559
6ZU5|1|L50|C|2560
6ZU5|1|L50|C|2561
6ZU5|1|L50|A|2562
6ZU5|1|L50|C|2563
6ZU5|1|L50|G|2564
6ZU5|1|L50|A|2565
6ZU5|1|L50|C|2566

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31

Chain LP0

uL22