HL_6ZU9_019

3D structure

PDB id

6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast ABCE1-bound 48S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

UGGCCGGUCGGAUUUCCA

Length

18 nucleotides

Bulged bases

6ZU9|1|2|C|658

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU9|1|2|U|650
6ZU9|1|2|G|651
6ZU9|1|2|G|652
6ZU9|1|2|C|653
6ZU9|1|2|C|654
6ZU9|1|2|G|655
6ZU9|1|2|G|656
6ZU9|1|2|U|657
6ZU9|1|2|C|658
6ZU9|1|2|G|676
6ZU9|1|2|G|677
6ZU9|1|2|A|678
6ZU9|1|2|U|679
6ZU9|1|2|U|680
6ZU9|1|2|U|681
6ZU9|1|2|C|682
6ZU9|1|2|C|683
6ZU9|1|2|A|684

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain W

40S ribosomal protein S9-A

Chain p

Eukaryotic translation initiation factor 3 subunit B