HL_6ZU9_027
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UUUUUUAAUG
- Length
- 10 nucleotides
- Bulged bases
- 6ZU9|1|2|U|1059
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZU9_027 not in the Motif Atlas
- Homologous match to HL_8P9A_212
- Geometric discrepancy: 0.3873
- The information below is about HL_8P9A_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61768.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6ZU9|1|2|U|1055
6ZU9|1|2|U|1056
6ZU9|1|2|U|1057
6ZU9|1|2|U|1058
6ZU9|1|2|U|1059
6ZU9|1|2|U|1060
6ZU9|1|2|A|1061
6ZU9|1|2|A|1062
6ZU9|1|2|U|1063
6ZU9|1|2|G|1064
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain I
- 40S ribosomal protein S17-A
- Chain Q
- 40S ribosomal protein S1-A
- Chain f
- 40S ribosomal protein S27-A
- Chain q
- Eukaryotic translation initiation factor 3 subunit C
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