HL_6ZVI_002
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUAGGAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZVI_002 not in the Motif Atlas
- Homologous match to HL_4YCO_002
- Geometric discrepancy: 0.1639
- The information below is about HL_4YCO_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6ZVI|1|d|A|31
6ZVI|1|d|U|32
6ZVI|1|d|U|33
6ZVI|1|d|A|34
6ZVI|1|d|G|35
6ZVI|1|d|G|36
6ZVI|1|d|A|37
6ZVI|1|d|A|38
6ZVI|1|d|U|39
Current chains
- Chain d
- A/P-site tRNA
Nearby chains
- Chain H
- 40S ribosomal protein S23-A
- Chain e
- Transfer RNA; tRNA
- Chain f
- mRNA
- Chain h
- Small subunit ribosomal RNA; SSU rRNA
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