HL_6ZVI_022

3D structure

PDB id

6ZVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mbf1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUGUG

Length

7 nucleotides

Bulged bases

6ZVI|1|h|U|718, 6ZVI|1|h|U|719, 6ZVI|1|h|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZVI_022 not in the Motif Atlas

Geometric match to HL_7KI3_001

Geometric discrepancy: 0.1803

The information below is about HL_7KI3_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6ZVI|1|h|C|716
6ZVI|1|h|C|717
6ZVI|1|h|U|718
6ZVI|1|h|U|719
6ZVI|1|h|G|720
6ZVI|1|h|U|721
6ZVI|1|h|G|722

Current chains

Chain h

18S rRNA

Nearby chains