HL_6ZVI_040
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 6ZVI|1|h|G|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZVI_040 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.2014
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6ZVI|1|h|G|1594
6ZVI|1|h|U|1595
6ZVI|1|h|C|1596
6ZVI|1|h|A|1597
6ZVI|1|h|U|1598
6ZVI|1|h|C|1599
6ZVI|1|h|A|1600
6ZVI|1|h|G|1601
6ZVI|1|h|C|1602
Current chains
- Chain h
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S19-A
- Chain C
- RPS20 isoform 1
- Chain O
- RPS29A isoform 1
- Chain y
- 40S ribosomal protein S16-A
Coloring options: