HL_6ZXE_017

3D structure

PDB id

6ZXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXE|1|2|U|885
6ZXE|1|2|A|886
6ZXE|1|2|U|887
6ZXE|1|2|U|888
6ZXE|1|2|U|889
6ZXE|1|2|U|890
6ZXE|1|2|G|891
6ZXE|1|2|U|892
6ZXE|1|2|U|893
6ZXE|1|2|G|894
6ZXE|1|2|G|895
6ZXE|1|2|U|896
6ZXE|1|2|U|897
6ZXE|1|2|U|898
6ZXE|1|2|U|899
6ZXE|1|2|C|900
6ZXE|1|2|G|901

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6

Chain L

40S ribosomal protein S11