HL_7A0S_009

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

AACGCUUGCGUU

Length

12 nucleotides

Bulged bases (A, C, G, U)

261G

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22031.2

Basepair signature

cWW-cWW-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|A|254
7A0S|1|X|A|255
7A0S|1|X|C|256
7A0S|1|X|G|257
7A0S|1|X|C|258
7A0S|1|X|U|259
7A0S|1|X|U|260
7A0S|1|X|G|261
7A0S|1|X|C|262
7A0S|1|X|G|263
7A0S|1|X|U|264
7A0S|1|X|U|265

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain U

50S ribosomal protein L28