HL_7A5F_017

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AAACAU

Length

6 nucleotides

Bulged bases

7A5F|1|A3|C|2322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_017 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2411

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7A5F|1|A3|A|2319
7A5F|1|A3|A|2320
7A5F|1|A3|A|2321
7A5F|1|A3|C|2322
7A5F|1|A3|A|2323
7A5F|1|A3|U|2324

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 03

39S ribosomal protein L32, mitochondrial

Chain O3

39S ribosomal protein L17, mitochondrial

Chain s3

39S ribosomal protein S30, mitochondrial,39S ribosomal protein S30, mitochondrial,39S ribosomal protein S30, mitochondrial,mL65