7A5F Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
HL_7A5F_001 | 1/24/7:63 | No text annotation | ||
HL_7A5F_002 | 1/A3/1746:1752 | No text annotation | geometric HL_7A0S_008 HL_76371.1 | |
HL_7A5F_003 | 1/A3/1786:1791 | GNRA | homologous HL_4WF9_015 HL_34789.1 | |
HL_7A5F_004 | 1/A3/1831:1839 | No text annotation | ||
HL_7A5F_005 | 1/A3/1847:1856 | T-loop with 2 stacked bulged bases | geometric HL_5J7L_150 NA | |
HL_7A5F_006 | 1/A3/1884:1889 | No text annotation | geometric HL_5TBW_006 NA | |
HL_7A5F_008 | 1/A3/1954:1963 | No text annotation | homologous HL_7RQB_023 NA | |
HL_7A5F_009 | 1/A3/1988:1996 | No text annotation | geometric HL_5TBW_021 NA | |
HL_7A5F_010 | 1/A3/2035:2040 | No text annotation | homologous HL_4WF9_025 HL_27530.1 | |
HL_7A5F_012 | 1/A3/2107:2114 | GNRA | homologous HL_4WF9_027 HL_34789.1 | |
HL_7A5F_013 | 1/A3/2129:2136 | No text annotation | homologous HL_5J7L_160 NA | |
HL_7A5F_016 | 1/A3/2279:2286 | No text annotation | geometric HL_1KH6_003 HL_05426.1 | |
HL_7A5F_017 | 1/A3/2319:2324 | No text annotation | geometric HL_5U3G_001 NA | |
HL_7A5F_019 | 1/A3/2400:2403 | Mini UNCG | geometric HL_7A0S_039 HL_90436.1 | |
HL_7A5F_020 | 1/A3/2428:2435 | No text annotation | homologous HL_7RQB_040 NA | |
HL_7A5F_021 | 1/A3/2497:2507 | No text annotation | homologous HL_7RQB_045 NA | |
HL_7A5F_022 | 1/A3/2518:2532 | No text annotation | ||
HL_7A5F_025 | 1/A3/2612:2620 | No text annotation | homologous HL_7A0S_048 HL_61418.1 | |
HL_7A5F_026 | 1/A3/2690:2699 | No text annotation | homologous HL_7RQB_050 NA | |
HL_7A5F_027 | 1/A3/2753:2795 | No text annotation | ||
HL_7A5F_028 | 1/A3/2812:2820 | No text annotation | homologous HL_7RQB_053 NA | |
HL_7A5F_029 | 1/A3/2828:2840 | No text annotation | ||
HL_7A5F_030 | 1/A3/2862:2870 | No text annotation | geometric HL_2ZZM_002 NA | |
HL_7A5F_031 | 1/A3/2902:2907 | GNRA | geometric HL_6N2V_002 HL_34789.1 | |
HL_7A5F_032 | 1/A3/2958:2966 | No text annotation | homologous HL_4WF9_056 HL_52011.1 | |
HL_7A5F_033 | 1/A3/3015:3022 | No text annotation | homologous HL_7RQB_061 NA | |
HL_7A5F_066 | 1/A3/3038:3044 | No text annotation | homologous HL_5J7L_195 NA | |
HL_7A5F_035 | 1/A3/3081:3086 | GNRA | homologous HL_5J7L_196 NA | |
HL_7A5F_036 | 1/A3/3126:3131 | GNRA | geometric HL_3IWN_001 HL_34789.1 | |
HL_7A5F_037 | 1/A3/3154:3159 | No text annotation | geometric HL_7A0S_007 HL_51020.1 | |
HL_7A5F_038 | 1/A3/3176:3193 | No text annotation | geometric HL_7A0S_074 NA | |
HL_7A5F_039 | 1/A3/3216:3224 | No text annotation | geometric HL_5J7L_201 NA | |
HL_7A5F_040 | 1/A6/658:668 | No text annotation | homologous HL_4LFB_001 HL_31940.1 | |
HL_7A5F_041 | 1/A6/705:712 | No text annotation | geometric HL_5J7L_149 NA | |
HL_7A5F_043 | 1/A6/796:800 | No text annotation | geometric HL_5TBW_004 NA | |
HL_7A5F_044 | 1/A6/808:813 | Mini UNCG | geometric HL_5SWD_005 HL_90436.1 | |
HL_7A5F_045 | 1/A6/846:851 | GNRA | homologous HL_4LFB_010 HL_34789.1 | |
HL_7A5F_046 | 1/A6/898:903 | GNRA | geometric HL_1G1X_003 NA | |
HL_7A5F_047 | 1/A6/993:1002 | No text annotation | geometric HL_4LFB_015 HL_38491.1 | |
HL_7A5F_048 | 1/A6/1027:1032 | GNRA | geometric HL_5J7L_016 NA | |
HL_7A5F_049 | 1/A6/1078:1088 | No text annotation | homologous HL_4LFB_017 HL_38491.1 | |
HL_7A5F_051 | 1/A6/1154:1159 | Mini UNCG | geometric HL_6AAX_001 HL_12626.1 | |
HL_7A5F_052 | 1/A6/1221:1230 | No text annotation | homologous HL_5J7L_021 NA | |
HL_7A5F_053 | 1/A6/1285:1291 | No text annotation | geometric HL_5TBW_006 NA | |
HL_7A5F_054 | 1/A6/1314:1319 | Externally structured | geometric HL_8C3A_022 NA | |
HL_7A5F_055 | 1/A6/1377:1383 | No text annotation | geometric HL_5TBW_006 NA | |
HL_7A5F_057 | 1/A6/1444:1454 | No text annotation | homologous HL_4LFB_030 HL_86432.1 | |
HL_7A5F_059 | 1/A6/1584:1589 | GNRA | homologous HL_4LFB_032 HL_34789.1 | |
HL_7A5F_061 | 1/B3/1630:1638 | Anticodon loop related | geometric HL_5T83_002 NA |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
HL_7A5F_007 | No text annotation | ||
HL_7A5F_011 | No text annotation | ||
HL_7A5F_014 | No text annotation | ||
HL_7A5F_063 | No text annotation | ||
HL_7A5F_015 | GNRA wlth tandem sheared | ||
HL_7A5F_018 | No text annotation | ||
HL_7A5F_023 | No text annotation | ||
HL_7A5F_065 | No text annotation | ||
HL_7A5F_024 | No text annotation | ||
HL_7A5F_064 | GNRA with extra near cWW | ||
HL_7A5F_034 | GNRA wlth tandem sheared | ||
HL_7A5F_042 | GNRA variation | ||
HL_7A5F_050 | No text annotation | ||
HL_7A5F_056 | T-loop with 2 bulged bases not stacked | ||
HL_7A5F_058 | No text annotation | ||
HL_7A5F_060 | tRNA D-loop | ||
HL_7A5F_062 | No text annotation |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
IL_7A5F_001 | 1/A3/1672:1678, 1/A3/1797:1816 | No text annotation | ||
IL_7A5F_002 | 1/A3/1682:1683, 1/A3/1768:1770 | Single bulged A | homologous IL_7A0S_002 IL_14190.1 | |
IL_7A5F_003 | 1/A3/1739:1745, 1/A3/1753:1758 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_106 IL_02666.1 | |
IL_7A5F_004 | 1/A3/1845:1847, 1/A3/1856:1858 | Isolated non-canonical cWW pair | homologous IL_5J7L_257 NA | |
IL_7A5F_005 | 1/A3/1877:1879, 1/A3/1895:1897 | Isolated non-canonical cWW pair | geometric IL_3GM7_004 IL_01003.1 | |
IL_7A5F_006 | 1/A3/1880:1883, 1/A3/1890:1894 | No text annotation | ||
IL_7A5F_007 | 1/A3/1904:1906, 1/A3/2016:2018 | Isolated non-canonical cWW pair | geometric IL_4WF9_020 IL_01003.1 | |
IL_7A5F_008 | 1/A3/1906:1910, 1/A3/2009:2016 | tHW-tHW cross-strand stack | homologous IL_7RQB_018 NA | |
IL_7A5F_009 | 1/A3/1913:1915, 1/A3/2004:2006 | Isolated non-canonical cWW pair | geometric IL_5TBW_079 NA | |
IL_7A5F_102 | 1/A3/1925:1927, 1/A3/1977:1979 | Isolated non-canonical cWW contact | geometric IL_5UNE_009 NA | |
IL_7A5F_011 | 1/A3/1929:1930, 1/A3/1973:1975 | Single bulged A | geometric IL_5J7L_261 NA | |
IL_7A5F_012 | 1/A3/1948:1951, 1/A3/1966:1968 | Major groove platform with extra cWW | homologous IL_7RQB_022 NA | |
IL_7A5F_013 | 1/A3/1985:1987, 1/A3/1997:2001 | Multiple bulged bases | geometric IL_5J7L_265 NA | |
IL_7A5F_014 | 1/A3/2046:2048, 1/A3/2091:2094 | No text annotation | geometric IL_8P9A_292 IL_15698.4 | |
IL_7A5F_015 | 1/A3/2057:2063, 1/A3/2076:2082 | No text annotation | ||
IL_7A5F_016 | 1/A3/2145:2147, 1/A3/2254:2255 | Single bulged C | homologous IL_5J7L_276 NA | |
IL_7A5F_017 | 1/A3/2149:2153, 1/A3/2248:2252 | UAA/GAN | homologous IL_7RQB_036 NA | |
IL_7A5F_018 | 1/A3/2168:2170, 1/A3/2190:2192 | Isolated near basepair | geometric IL_4V88_406 NA | |
IL_7A5F_019 | 1/A3/2170:2173, 1/A3/2187:2190 | No text annotation | homologous IL_5J7L_285 NA | |
IL_7A5F_021 | 1/A3/2306:2313, 1/A3/2674:2680 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_289 NA | |
IL_7A5F_022 | 1/A3/2329:2333, 1/A3/2441:2448 | No text annotation | ||
IL_7A5F_104 | 1/A3/2377:2381, 1/A3/2411:2419 | No text annotation | ||
IL_7A5F_116 | 1/A3/2384:2400, 1/A3/2403:2408 | No text annotation | ||
IL_7A5F_023 | 1/A3/2456:2461, 1/A3/2666:2668 | No text annotation | ||
IL_7A5F_024 | 1/A3/2467:2469, 1/A3/2658:2660 | Isolated tWW turn | homologous IL_4WF9_063 IL_10432.1 | |
IL_7A5F_025 | 1/A3/2470:2473, 1/A3/2656:2657 | Major groove platform; stack outside cWW | homologous IL_7RQB_066 NA | |
IL_7A5F_106 | 1/A3/2470:2478, 1/A3/2653:2657 | No text annotation | homologous IL_4WF9_117 IL_80252.1 | |
IL_7A5F_026 | 1/A3/2473:2478, 1/A3/2653:2656 | Intercalated tWH | geometric IL_4WF9_065 IL_28217.1 | |
IL_7A5F_027 | 1/A3/2478:2487, 1/A3/2648:2653 | No text annotation | ||
IL_7A5F_028 | 1/A3/2490:2491, 1/A3/2643:2645 | Single bulged A | homologous IL_7RQB_069 NA | |
IL_7A5F_029 | 1/A3/2548:2551, 1/A3/2566:2567 | Minor groove platform, major groove intercalation | homologous IL_5J7L_314 NA | |
IL_7A5F_030 | 1/A3/2552:2553, 1/A3/2562:2565 | Major groove intercalation | homologous IL_7A0S_067 IL_78536.1 | |
IL_7A5F_031 | 1/A3/2596:2597, 1/A3/2627:2630 | Multiple bulged bases | geometric IL_7V9E_001 NA | |
IL_7A5F_032 | 1/A3/2597:2608, 1/A3/2624:2627 | No text annotation | homologous IL_4WF9_077 IL_84014.1 | |
IL_7A5F_033 | 1/A3/2712:2715, 1/A3/3104:3106 | Major groove platform with extra pair | geometric IL_3V7E_003 NA | |
IL_7A5F_034 | 1/A3/2717:2719, 1/A3/3099:3102 | No text annotation | homologous IL_5J7L_321 NA | |
IL_7A5F_035 | 1/A3/2730:2732, 1/A3/2929:2930 | Single bulged U | homologous IL_7RQB_080 NA | |
IL_7A5F_036 | 1/A3/2733:2734, 1/A3/2925:2928 | Minor groove platform | homologous IL_7RQB_081 NA | |
IL_7A5F_117 | 1/A3/2744:2746, 1/A3/2802:2803 | Minor groove platform | geometric IL_7A0S_003 IL_34520.1 | |
IL_7A5F_039 | 1/A3/2856:2860, 1/A3/2872:2876 | Double sheared with non-canonical cWW | geometric IL_5J7L_274 NA | |
IL_7A5F_040 | 1/A3/2940:2941, 1/A3/2985:2987 | Single stack bend | homologous IL_4WF9_089 IL_15011.1 | |
IL_7A5F_108 | 1/A3/2940:2942, 1/A3/2983:2987 | No text annotation | homologous IL_5J7L_335 NA | |
IL_7A5F_041 | 1/A3/2941:2942, 1/A3/2983:2985 | Major groove platform | geometric IL_4OQU_002 IL_48076.7 | |
IL_7A5F_042 | 1/A3/2943:2946, 1/A3/2980:2982 | Major groove platform with extra pair | homologous IL_7RQB_093 NA | |
IL_7A5F_043 | 1/A3/2946:2948, 1/A3/2976:2980 | Major groove minor groove platform with extra cWW | geometric IL_7RQB_094 NA | |
IL_7A5F_044 | 1/A3/2953:2955, 1/A3/2968:2971 | No text annotation | geometric IL_4P3T_002 NA | |
IL_7A5F_045 | 1/A3/2955:2957, 1/A3/2967:2968 | Minor groove platform | geometric IL_4V88_454 NA | |
IL_7A5F_046 | 1/A3/2994:2995, 1/A3/3067:3069 | Major groove platform | geometric IL_4V9F_086 IL_46637.1 | |
IL_7A5F_047 | 1/A3/2997:2999, 1/A3/3061:3065 | Isolated non-canonical cWW with bulges | geometric IL_7RQB_097 NA | |
IL_7A5F_048 | 1/A3/2999:3000, 1/A3/3058:3061 | No text annotation | homologous IL_5J7L_341 NA | |
IL_7A5F_049 | 1/A3/3008:3010, 1/A3/3027:3031 | No text annotation | ||
IL_7A5F_050 | 1/A3/3078:3079, 1/A3/3088:3090 | Single bulged A | homologous IL_7RQB_101 NA | |
IL_7A5F_051 | 1/A3/3115:3117, 1/A3/3139:3141 | No text annotation | geometric IL_4KR9_001 NA | |
IL_7A5F_052 | 1/A3/3119:3126, 1/A3/3131:3137 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_5TBW_116 NA | |
IL_7A5F_053 | 1/A3/3148:3152, 1/A3/3161:3163 | C-loop | geometric IL_4JRC_003 IL_63596.12 | |
IL_7A5F_054 | 1/A6/653:655, 1/A6/671:672 | No text annotation | ||
IL_7A5F_055 | 1/A6/678:680, 1/A6/925:927 | Isolated non-canonical cWW pair | geometric IL_6IA2_004 NA | |
IL_7A5F_118 | 1/A6/689:690, 1/A6/863:865 | Single bulged A | homologous IL_5J7L_002 NA | |
IL_7A5F_057 | 1/A6/694:696, 1/A6/826:827 | Single bulged A | geometric IL_4R4V_004 IL_14190.1 | |
IL_7A5F_059 | 1/A6/731:733, 1/A6/748:751 | Minor groove platform with extra cWW | geometric IL_7RQB_031 NA | |
IL_7A5F_060 | 1/A6/733:736, 1/A6/746:748 | Minor groove platform with extra cWW | geometric IL_7RQB_031 NA | |
IL_7A5F_061 | 1/A6/760:765, 1/A6/783:790 | Kink-turn with non-sequential stacking | geometric IL_4LFB_011 IL_46174.4 | |
IL_7A5F_062 | 1/A6/766:769, 1/A6/781:782 | Major groove platform | geometric IL_5Y85_005 IL_48076.7 | |
IL_7A5F_110 | 1/A6/766:770, 1/A6/779:782 | No text annotation | ||
IL_7A5F_063 | 1/A6/769:770, 1/A6/779:781 | No text annotation | ||
IL_7A5F_064 | 1/A6/834:836, 1/A6/859:860 | Single bulged U | geometric IL_5J7L_017 NA | |
IL_7A5F_065 | 1/A6/838:842, 1/A6/856:857 | C-loop | homologous IL_5J7L_018 NA | |
IL_7A5F_066 | 1/A6/842:843, 1/A6/854:856 | Single bulged A | geometric IL_2QUX_002 IL_14190.1 | |
IL_7A5F_067 | 1/A6/880:889, 1/A6/914:917 | No text annotation | ||
IL_7A5F_068 | 1/A6/891:897, 1/A6/904:912 | Kink-turn related | geometric IL_4V88_415 NA | |
IL_7A5F_069 | 1/A6/939:945, 1/A6/1137:1138 | No text annotation | homologous IL_5J7L_026 NA | |
IL_7A5F_111 | 1/A6/950:954, 1/A6/1048:1053 | No text annotation | ||
IL_7A5F_071 | 1/A6/978:984, 1/A6/1012:1018 | No text annotation | ||
IL_7A5F_072 | 1/A6/986:988, 1/A6/1008:1010 | Isolated non-canonical cWW pair | geometric IL_4LFB_010 IL_01003.1 | |
IL_7A5F_073 | 1/A6/990:992, 1/A6/1003:1006 | No text annotation | ||
IL_7A5F_074 | 1/A6/1024:1026, 1/A6/1033:1034 | Other IL | geometric IL_3WBM_004 NA | |
IL_7A5F_075 | 1/A6/1066:1070, 1/A6/1096:1097 | Left turn | homologous IL_5J7L_036 NA | |
IL_7A5F_076 | 1/A6/1071:1075, 1/A6/1091:1095 | tSH-tHW-tHS | homologous IL_4LFB_033 IL_05821.1 | |
IL_7A5F_077 | 1/A6/1113:1115, 1/A6/1134:1136 | Isolated non-canonical cWW pair | geometric IL_3MEI_002 NA | |
IL_7A5F_119 | 1/A6/1143:1151, 1/A6/1162:1168 | No text annotation | ||
IL_7A5F_079 | 1/A6/1179:1180, 1/A6/1481:1483 | Single bulged A | homologous IL_6CZR_147 NA | |
IL_7A5F_080 | 1/A6/1182:1184, 1/A6/1478:1479 | Single bulged G | homologous IL_6CZR_148 NA | |
IL_7A5F_081 | 1/A6/1190:1194, 1/A6/1468:1472 | C-loop | geometric IL_1KOG_007 IL_63596.12 | |
IL_7A5F_083 | 1/A6/1248:1256, 1/A6/1344:1349 | No text annotation | ||
IL_7A5F_084 | 1/A6/1257:1259, 1/A6/1342:1343 | Single bulged U | homologous IL_4LFB_042 IL_97561.1 | |
IL_7A5F_085 | 1/A6/1261:1265, 1/A6/1338:1340 | Isolated cWS basepair | homologous IL_4LFB_044 IL_82453.1 | |
IL_7A5F_086 | 1/A6/1266:1267, 1/A6/1333:1337 | Minor groove platform | homologous IL_4LFB_045 IL_24264.1 | |
IL_7A5F_087 | 1/A6/1269:1270, 1/A6/1329:1331 | Single bulged U | homologous IL_4LFB_046 IL_97561.1 | |
IL_7A5F_088 | 1/A6/1270:1272, 1/A6/1327:1329 | Isolated non-canonical cWW pair | geometric IL_5J7L_050 NA | |
IL_7A5F_114 | 1/A6/1278:1281, 1/A6/1302:1305 | Double sheared | geometric IL_1SA9_002 IL_58355.1 | |
IL_7A5F_090 | 1/A6/1282:1283, 1/A6/1293:1301 | No text annotation | geometric IL_8S95_001 NA | |
IL_7A5F_091 | 1/A6/1392:1397, 1/A6/1417:1422 | No text annotation | geometric IL_4LFB_055 IL_57885.1 | |
IL_7A5F_092 | 1/A6/1487:1489, 1/A6/1570:1573 | No text annotation | geometric IL_5J7L_058 NA | |
IL_7A5F_093 | 1/A6/1489:1492, 1/A6/1566:1570 | No text annotation | geometric IL_4V88_464 NA | |
IL_7A5F_094 | 1/A6/1493:1495, 1/A6/1563:1565 | Isolated non-canonical cWW pair | geometric IL_3GM7_006 IL_01003.1 | |
IL_7A5F_095 | 1/A6/1495:1499, 1/A6/1558:1563 | No text annotation | ||
IL_7A5F_096 | 1/A6/1504:1508, 1/A6/1550:1553 | UAA/GAN related | geometric IL_2R8S_002 IL_77691.6 | |
IL_7A5F_097 | 1/A6/1511:1514, 1/A6/1544:1547 | Tandem non-canonical cWW pairs | geometric IL_2PN3_004 IL_71194.1 | |
IL_7A5F_115 | 1/A6/1514:1518, 1/A6/1539:1544 | No text annotation | ||
IL_7A5F_099 | 1/A6/1515:1518, 1/A6/1539:1542 | No text annotation | ||
IL_7A5F_101 | 1/B3/1627:1629, 1/B3/1639:1641 | Isolated non-canonical cWW pair | geometric IL_4WF9_042 IL_01003.1 |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
IL_7A5F_010 | Tandem non-canonical cWW pairs | ||
IL_7A5F_103 | No text annotation | ||
IL_7A5F_020 | No text annotation | ||
IL_7A5F_105 | No text annotation | ||
IL_7A5F_107 | No text annotation | ||
IL_7A5F_037 | No text annotation | ||
IL_7A5F_038 | No text annotation | ||
IL_7A5F_109 | No text annotation | ||
IL_7A5F_056 | Isolated non-canonical cWW with bulges | ||
IL_7A5F_058 | Minor groove platform | ||
IL_7A5F_070 | No text annotation | ||
IL_7A5F_112 | tSH-tHW-tHS-cWW | ||
IL_7A5F_078 | No text annotation | ||
IL_7A5F_082 | No text annotation | ||
IL_7A5F_113 | No text annotation | ||
IL_7A5F_089 | Double sheared with non-canonical cWW | ||
IL_7A5F_098 | No text annotation | ||
IL_7A5F_100 | No text annotation |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
J3_7A5F_014 | 1/A3/1678:1681, 1/A3/1771:1785, 1/A3/1792:1797 | No text annotation | ||
J3_7A5F_001 | 1/A3/1915:1921, 1/A3/1983:1985, 1/A3/2001:2004 | No text annotation | homologous J3_4WF9_002 J3_46658.1 | |
J3_7A5F_002 | 1/A3/1930:1932, 1/A3/1942:1946, 1/A3/1970:1973 | No text annotation | homologous J3_7RQB_005 NA | |
J3_7A5F_003 | 1/A3/2336:2343, 1/A3/2423:2427, 1/A3/2436:2438 | No text annotation | ||
J3_7A5F_004 | 1/A3/2343:2345, 1/A3/2368:2375, 1/A3/2421:2423 | No text annotation | ||
J3_7A5F_016 | 1/A3/2846:2848, 1/A3/2890:2900, 1/A3/2909:2915 | No text annotation | ||
J3_7A5F_005 | 1/A3/3004:3007, 1/A3/3032:3034, 1/A3/3048:3054 | No text annotation | homologous J3_7RQB_012 NA | |
J3_7A5F_006 | 1/A6/681:684, 1/A6/870:876, 1/A6/921:924 | No text annotation | ||
J3_7A5F_007 | 1/A6/691:694, 1/A6/827:834, 1/A6/860:862 | No text annotation | ||
J3_7A5F_008 | 1/A6/977:978, 1/A6/1018:1024, 1/A6/1034:1035 | No text annotation | ||
J3_7A5F_009 | 1/A6/1196:1198, 1/A6/1432:1438, 1/A6/1460:1466 | No text annotation | ||
J3_7A5F_010 | 1/A6/1202:1205, 1/A6/1368:1370, 1/A6/1425:1428 | No text annotation | homologous J3_5J7L_005 NA | |
J3_7A5F_011 | 1/A6/1214:1220, 1/A6/1231:1242, 1/A6/1355:1358 | No text annotation | ||
J3_7A5F_017 | 1/A6/1272:1277, 1/A6/1306:1312, 1/A6/1321:1327 | No text annotation | homologous J3_4LFB_007 J3_01343.1 | |
J4_7A5F_001 | 1/A3/2314:2317, 1/A3/2326:2327, 1/A3/2450:2453, 1/A3/2671:2673 | No text annotation | ||
J4_7A5F_002 | 1/A3/2336:2345, 1/A3/2368:2375, 1/A3/2421:2427, 1/A3/2436:2438 | No text annotation | ||
J4_7A5F_003 | 1/A3/2492:2496, 1/A3/2508:2513, 1/A3/2537:2542, 1/A3/2637:2642 | No text annotation | ||
J4_7A5F_004 | 1/A3/2544:2546, 1/A3/2569:2570, 1/A3/2587:2596, 1/A3/2630:2635 | No text annotation | homologous J4_5J7L_026 NA | |
J4_7A5F_005 | 1/A6/702:705, 1/A6/712:719, 1/A6/804:806, 1/A6/815:821 | No text annotation | ||
J4_7A5F_006 | 1/A6/721:729, 1/A6/753:757, 1/A6/793:795, 1/A6/801:802 | No text annotation | ||
J4_7A5F_007 | 1/A6/945:947, 1/A6/1056:1061, 1/A6/1102:1113, 1/A6/1136:1137 | No text annotation | homologous J4_5J7L_003 NA | |
J5_7A5F_001 | 1/A3/1827:1829, 1/A3/1841:1845, 1/A3/1858:1860, 1/A3/2305:2306, 1/A3/2680:2681 | No text annotation | homologous J5_7A0S_003 J5_43153.6 | |
J5_7A5F_002 | 1/A3/1865:1875, 1/A3/1899:1903, 1/A3/2019:2022, 1/A3/2271:2275, 1/A3/2290:2300 | No text annotation | ||
J5_7A5F_006 | 1/A3/2720:2727, 1/A3/2933:2940, 1/A3/2987:2993, 1/A3/3070:3075, 1/A3/3093:3098 | No text annotation | ||
J5_7A5F_005 | 1/A3/2737:2740, 1/A3/2807:2810, 1/A3/2822:2823, 1/A3/2845:2846, 1/A3/2915:2922 | No text annotation | homologous J5_7A0S_007 J5_39529.2 | |
J6_7A5F_001 | 1/A3/2027:2032, 1/A3/2043:2045, 1/A3/2095:2098, 1/A3/2123:2127, 1/A3/2138:2143, 1/A3/2257:2266 | No text annotation | ||
J6_7A5F_003 | 1/A3/2737:2740, 1/A3/2807:2810, 1/A3/2822:2823, 1/A3/2845:2848, 1/A3/2890:2900, 1/A3/2909:2922 | No text annotation | ||
J6_7A5F_002 | 1/A3/2737:2740, 1/A3/2807:2810, 1/A3/2822:2823, 1/A3/2845:2848, 1/A3/2890:2901, 1/A3/2908:2922 | No text annotation |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
J3_7A5F_015 | No text annotation | ||
J3_7A5F_012 | No text annotation | ||
J3_7A5F_013 | No text annotation | ||
J5_7A5F_003 | No text annotation | ||
J5_7A5F_004 | No text annotation |
Coloring options: