3D structure

PDB id
7A5F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
CUUCACCAG
Length
9 nucleotides
Bulged bases
7A5F|1|A3|U|2864, 7A5F|1|A3|C|2865
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7A5F_030 not in the Motif Atlas
Geometric match to HL_2ZZM_002
Geometric discrepancy: 0.3429
The information below is about HL_2ZZM_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_13963.3
Basepair signature
cWW-F-F
Number of instances in this motif group
4

Unit IDs

7A5F|1|A3|C|2862
7A5F|1|A3|U|2863
7A5F|1|A3|U|2864
7A5F|1|A3|C|2865
7A5F|1|A3|A|2866
7A5F|1|A3|C|2867
7A5F|1|A3|C|2868
7A5F|1|A3|A|2869
7A5F|1|A3|G|2870

Current chains

Chain A3
16S rRNA

Nearby chains

Chain 33
39S ribosomal protein L35, mitochondrial
Chain 63
39S ribosomal protein L38, mitochondrial
Chain M3
39S ribosomal protein L15, mitochondrial
Chain W3
39S ribosomal protein L27, mitochondrial

Coloring options:


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