HL_7A5F_032

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_032 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.1709

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7A5F|1|A3|A|2958
7A5F|1|A3|G|2959
7A5F|1|A3|U|2960
7A5F|1|A3|C|2961
7A5F|1|A3|C|2962
7A5F|1|A3|A|2963
7A5F|1|A3|U|2964
7A5F|1|A3|A|2965
7A5F|1|A3|U|2966

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 43

39S ribosomal protein L36, mitochondrial

Chain N3

39S ribosomal protein L16, mitochondrial