HL_7A5F_042

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AGCAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_042 not in the Motif Atlas

Geometric match to HL_1U6B_004

Geometric discrepancy: 0.2245

The information below is about HL_1U6B_004

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7A5F|1|A6|A|772
7A5F|1|A6|G|773
7A5F|1|A6|C|774
7A5F|1|A6|A|775
7A5F|1|A6|A|776
7A5F|1|A6|U|777

Current chains

Chain A6

12S rRNA

Nearby chains

Chain L6

28S ribosomal protein S15, mitochondrial

Chain N6

28S ribosomal protein S17, mitochondrial