HL_7A5F_059

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UGGAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_059 not in the Motif Atlas

Homologous match to HL_4LFB_032

Geometric discrepancy: 0.1378

The information below is about HL_4LFB_032

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7A5F|1|A6|U|1584
7A5F|1|A6|G|1585
7A5F|1|A6|G|1586
7A5F|1|A6|A|1587
7A5F|1|A6|A|1588
7A5F|1|A6|A|1589

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain d6

Aurora kinase A-interacting protein