HL_7A5F_060

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UUAAAA

Length

6 nucleotides

Bulged bases

7A5F|1|B3|U|1614

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_060 not in the Motif Atlas

Geometric match to HL_2AZX_004

Geometric discrepancy: 0.2586

The information below is about HL_2AZX_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20811.4

Basepair signature

cWW-cWS-F

Number of instances in this motif group

14

Unit IDs

7A5F|1|B3|U|1613
7A5F|1|B3|U|1614
7A5F|1|B3|A|1615
7A5F|1|B3|A|1616
7A5F|1|B3|A|1621
7A5F|1|B3|A|1622

Current chains

Chain B3

mt-tRNA Val

Nearby chains

Chain 63

39S ribosomal protein L38, mitochondrial

Chain P3

39S ribosomal protein L18, mitochondrial