HL_7A5F_065

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CACAUG

Length

6 nucleotides

Bulged bases

7A5F|1|A3|A|2558, 7A5F|1|A3|U|2559

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_065 not in the Motif Atlas

Geometric match to HL_5AMQ_001

Geometric discrepancy: 0.2835

The information below is about HL_5AMQ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.2

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

7A5F|1|A3|C|2555
7A5F|1|A3|A|2556
7A5F|1|A3|C|2557
7A5F|1|A3|A|2558
7A5F|1|A3|U|2559
7A5F|1|A3|G|2560

Current chains

Chain A3

16S rRNA

Nearby chains

Chain A6

Small subunit ribosomal RNA; SSU rRNA

Chain D3

39S ribosomal protein L2, mitochondrial