HL_7A5G_016

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

CGUUCAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5G_016 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.184

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7A5G|1|A3|C|2202
7A5G|1|A3|G|2203
7A5G|1|A3|U|2204
7A5G|1|A3|U|2205
7A5G|1|A3|C|2206
7A5G|1|A3|A|2207
7A5G|1|A3|A|2208
7A5G|1|A3|G|2209

Current chains

Chain A3

16S rRNA

Nearby chains

Chain J3

39S ribosomal protein L11, mitochondrial

Chain j

Transfer RNA; tRNA

Chain l3

39S ribosomal protein L54, mitochondrial