HL_7A5G_066
3D structure
- PDB id
- 7A5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.33 Å
Loop
- Sequence
- GUUCGAAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7A5G_066 not in the Motif Atlas
- Homologous match to HL_6PMO_005
- Geometric discrepancy: 0.1994
- The information below is about HL_6PMO_005
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.4
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 143
Unit IDs
7A5G|1|j|G|54
7A5G|1|j|U|55
7A5G|1|j|U|56
7A5G|1|j|C|57
7A5G|1|j|G|58
7A5G|1|j|A|59
7A5G|1|j|A|60
7A5G|1|j|A|61
7A5G|1|j|C|62
Current chains
- Chain j
- E tRNA
Nearby chains
- Chain A3
- Large subunit ribosomal RNA; LSU rRNA
- Chain Z
- Elongation factor Tu, mitochondrial
Coloring options: