HL_7A5I_003

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAGCCUCACAGC

Length

12 nucleotides

Bulged bases

7A5I|1|99|U|54

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_003 not in the Motif Atlas

Homologous match to HL_5EL4_250

Geometric discrepancy: 0.5568

The information below is about HL_5EL4_250

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25222.2

Basepair signature

cWW-cWW-F-F-cWW-F-F-F-F-F-F

Number of instances in this motif group

8

Unit IDs

7A5I|1|99|G|49
7A5I|1|99|A|50
7A5I|1|99|G|51
7A5I|1|99|C|52
7A5I|1|99|C|53
7A5I|1|99|U|54
7A5I|1|99|C|55
7A5I|1|99|A|56
7A5I|1|99|C|57
7A5I|1|99|A|58
7A5I|1|99|G|59
7A5I|1|99|C|60

Current chains

Chain 99

mt-tRNA

Nearby chains

Chain 13

39S ribosomal protein L33, mitochondrial