HL_7A5J_009

3D structure

PDB id

7A5J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCGACAAAC

Length

9 nucleotides

Bulged bases

7A5J|1|A|A|1991, 7A5J|1|A|A|1994

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5J_009 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2324

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7A5J|1|A|G|1988
7A5J|1|A|C|1989
7A5J|1|A|G|1990
7A5J|1|A|A|1991
7A5J|1|A|C|1992
7A5J|1|A|A|1993
7A5J|1|A|A|1994
7A5J|1|A|A|1995
7A5J|1|A|C|1996

Current chains

Chain A

16S rRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial