HL_7A5K_033

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

7A5K|1|A3|G|3016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5K_033 not in the Motif Atlas

Homologous match to HL_5J7L_194

Geometric discrepancy: 0.106

The information below is about HL_5J7L_194

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

7A5K|1|A3|U|3015
7A5K|1|A3|G|3016
7A5K|1|A3|C|3017
7A5K|1|A3|A|3018
7A5K|1|A3|G|3019
7A5K|1|A3|C|3020
7A5K|1|A3|C|3021
7A5K|1|A3|G|3022

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 43

39S ribosomal protein L36, mitochondrial

Chain r1

Elongation factor G, mitochondrial