HL_7A5K_040

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUGGUCCUAG

Length

11 nucleotides

Bulged bases

7A5K|1|A6|U|660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5K_040 not in the Motif Atlas

Homologous match to HL_4LFB_001

Geometric discrepancy: 0.1509

The information below is about HL_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73535.1

Basepair signature

cWW-tHW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7A5K|1|A6|U|658
7A5K|1|A6|U|659
7A5K|1|A6|U|660
7A5K|1|A6|G|661
7A5K|1|A6|G|662
7A5K|1|A6|U|663
7A5K|1|A6|C|664
7A5K|1|A6|C|665
7A5K|1|A6|U|666
7A5K|1|A6|A|667
7A5K|1|A6|G|668

Current chains

Chain A6

12S rRNA

Nearby chains

Chain D6

28S ribosomal protein S5, mitochondrial