HL_7ABG_006

3D structure

PDB id

7ABG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-Bact-1 spliceosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7ABG|1|6|C|11

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ABG_006 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.312

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7ABG|1|6|C|8
7ABG|1|6|U|9
7ABG|1|6|U|10
7ABG|1|6|C|11
7ABG|1|6|G|12
7ABG|1|6|G|13

Current chains

Chain 6

U6 snRNA

Nearby chains