HL_7ABZ_006

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7ABZ|1|1|A|196, 7ABZ|1|1|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ABZ_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.1842

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7ABZ|1|1|G|194
7ABZ|1|1|A|195
7ABZ|1|1|A|196
7ABZ|1|1|A|197
7ABZ|1|1|C|198
7ABZ|1|1|A|199
7ABZ|1|1|U|200
7ABZ|1|1|C|201

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28