HL_7ABZ_029

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ABZ_029 not in the Motif Atlas

Homologous match to HL_7RQB_030

Geometric discrepancy: 0.3294

The information below is about HL_7RQB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|1|C|1092
7ABZ|1|1|G|1093
7ABZ|1|1|U|1094
7ABZ|1|1|A|1095
7ABZ|1|1|A|1096
7ABZ|1|1|U|1097
7ABZ|1|1|A|1098
7ABZ|1|1|G|1099

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 4

Transfer-messenger RNA; tmRNA

Chain F

50S ribosomal protein L6

Chain f

50S ribosomal protein L36